MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Streptococcus danieliae
1_1BalbC1O2_S1
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 2,609
bases: 1,350,382 bps
CDS: 1,017
rRNA: 4
Repeat region:
tmRNA:
tRNA: 30
misc RNA:
Total features: 1,051
Total number of protein coding genes annotated/found:
1,017
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Items 1 - 20
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Molecule ^
PID/GenBank ID *
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5055|JADGLV010002604.1
SEQF5055_01051
Genome Viewer
NA
AA
633/211
825-193
putative protein YbbA
SEQF5055|JADGLV010002602.1
SEQF5055_01050
Genome Viewer
NA
AA
867/289
3007-3873
hypothetical protein
SEQF5055|JADGLV010002602.1
SEQF5055_01049
Genome Viewer
NA
AA
621/207
2268-2888
V-type sodium ATPase subunit D
SEQF5055|JADGLV010002602.1
SEQF5055_01048
Genome Viewer
NA
AA
1389/463
855-2243
V-type sodium ATPase subunit B
SEQF5055|JADGLV010002602.1
SEQF5055_01047
Genome Viewer
NA
AA
819/273
37-855
V-type sodium ATPase catalytic subunit A
SEQF5055|JADGLV010002601.1
SEQF5055_01046
Genome Viewer
NA
AA
378/126
918-541
Arginine--tRNA ligase
SEQF5055|JADGLV010002601.1
SEQF5055_01045
Genome Viewer
NA
AA
135/45
347-481
hypothetical protein
SEQF5055|JADGLV010002600.1
SEQF5055_01044
Genome Viewer
NA
AA
429/143
494-66
Glutamate 5-kinase 1
SEQF5055|JADGLV010002597.1
SEQF5055_01043
Genome Viewer
NA
AA
150/50
47-196
hypothetical protein
SEQF5055|JADGLV010002595.1
SEQF5055_01042
Genome Viewer
NA
AA
291/97
1046-756
hypothetical protein
SEQF5055|JADGLV010002595.1
SEQF5055_01041
Genome Viewer
NA
AA
156/52
26-181
hypothetical protein
SEQF5055|JADGLV010002594.1
SEQF5055_01040
Genome Viewer
NA
AA
192/64
1-192
PTS-dependent dihydroxyacetone kinase%2C phosphotransferase subunit DhaM
SEQF5055|JADGLV010002592.1
SEQF5055_01039
Genome Viewer
NA
AA
339/113
467-129
Glyceraldehyde-3-phosphate dehydrogenase
SEQF5055|JADGLV010002590.1
SEQF5055_01038
Genome Viewer
NA
AA
411/137
6-416
V-type sodium ATPase subunit K
SEQF5055|JADGLV010002587.1
SEQF5055_01037
Genome Viewer
NA
AA
729/243
1180-452
hypothetical protein
SEQF5055|JADGLV010002585.1
SEQF5055_01036
Genome Viewer
NA
AA
264/88
540-277
30S ribosomal protein S7
SEQF5055|JADGLV010002580.1
SEQF5055_01035
Genome Viewer
NA
AA
963/321
1141-179
IS30 family transposase IS1252
SEQF5055|JADGLV010002575.1
SEQF5055_01034
Genome Viewer
NA
AA
795/265
2378-1584
Bacitracin transport ATP-binding protein BcrA
SEQF5055|JADGLV010002575.1
SEQF5055_01033
Genome Viewer
NA
AA
699/233
1600-902
hypothetical protein
SEQF5055|JADGLV010002575.1
SEQF5055_01032
Genome Viewer
NA
AA
936/312
35-970
Leucine--tRNA ligase
Items 1 - 20
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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